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Bookkeeping for online sellers

When you sell online, the money rarely reaches your bank the way the sale was made. A platform or payment provider collects it, keeps its fees and pays out later, so the books have to rebuild each sale from the platform's own reports.

  • By Book Keeping Pros
  • Sources checked 15 Oct 2026
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Key takeaways

  • A platform payout is usually many sales, less fees and refunds, so the deposit on your bank statement is not the same as your sales.
  • Recording full sales and platform fees separately, rather than only the payout, shows both what customers paid and what selling online costs.
  • Match each payout to the platform's report for the same period, so every deposit is explained by the sales, fees and refunds inside it.
  • business.gov.au says to capture every sale and return in your inventory records, which matters most when one stock pool feeds several channels.
  • Download platform reports regularly and store them with your other records, because they are the evidence behind each sale.

How online sales reach your bank

business.gov.au describes several ways to sell online: an online store on your own website, which it says is simplest to add with an ecommerce platform or plug-in that handles payment; an online marketplace with products from many sellers; and a store on a social media account, which generally doesn't handle payments and sends customers to your own online store to pay.

In each case someone else usually collects the customer's money first. business.gov.au notes that ecommerce platforms usually have subscription costs and may charge a fee for each transaction, and that marketplaces charge fees as well. It also explains that a buy now, pay later provider pays the business the full amount at the time of purchase, less a fee. What reaches your bank is a payout: many sales, less fees, refunds and any amounts held back, paid as one figure.

business.gov.au adds that in most online sales the receipt doubles as the invoice, because payment happens at the time of sale. The order records in the platform are therefore your main record of each sale.

Record the full sale and the fees separately

If only the payout is entered as income, sales look smaller than they were and the cost of selling online disappears from the books. Instead, use the payout report to record each part on its own line.

Illustrative example: one weekly marketplace payout broken into its parts
ItemAmount (AUD)
Product sales4,860.00
Shipping charged to customers312.00
Less: refunds to customers145.00
Less: marketplace selling fees583.20
Less: payment processing fees98.40
Payout to the bank account4,345.40

Illustrative example only: these rows show the method and are not sourced data.

A common way to do this is a clearing account for each platform. Sales and shipping go in, refunds and fees come out, and the payout is recorded as a transfer from the clearing account to the bank. Once a payout has been recorded, the clearing account should hold only amounts the platform hasn't paid out yet, such as recent sales or money it is holding back, which makes a missing or doubled entry easy to spot.

Match each payout to its report

The ATO's record-keeping tips suggest reconciling cash and EFTPOS sales regularly, by making sure the payments you have recorded match external records, daily, weekly or monthly depending on the business. Platform payouts call for the same check. For each one:

  1. Download the platform's payout or settlement report for the period it covers.
  2. Check its sales total against the orders recorded for the same period.
  3. Check the fees against the platform's fee statement.
  4. Confirm the payout figure matches the deposit on the bank statement.
  5. List anything left over, such as sales made near the end of a period that will be paid out in the next one, and look into anything you can't explain.

Keep each sales channel visible

If you sell through your own store and one or more marketplaces, record sales and fees for each channel in its own accounts or under its own tracking code. Then the profit and loss statement shows what each channel brings in and what it costs to sell there, rather than one blended figure.

business.gov.au points out that selling online lets you reach customers anywhere, including overseas. If a platform pays in another currency, keep its report of the original amounts with the bank statement showing what arrived in Australian dollars, and ask your accountant how to record the sale and any difference.

Record refunds, returns and disputes

  • Record each refund against sales, from the platform's refund report, rather than netting it into the next payout without a trace.
  • When goods come back in a condition to resell, put them back into your stock records.
  • When a customer disputes a payment and the platform takes the money back, record it with the order number, and keep the evidence you sent in reply.
  • Keep the order history for each refund, so the original sale and the refund can be matched later.

Keep stock records in step

business.gov.au describes two ways to track stock: a periodic system, where you count stock by hand and update spreadsheet or paper records, and a perpetual system, where software or a point-of-sale system updates the records with every purchase and sale. Either way, it says to capture every sale and return.

Selling the same products through several channels makes this harder, because each channel's orders draw on one pool of stock. Regular stocktakes, which business.gov.au says show whether the stock on hand matches your records, catch the differences that slip through.

Keep the platform's records

business.gov.au lists records of all income and sales transactions among the records to keep, and suggests backing up digital records, with a secure off-site copy if possible. A platform account can be closed or its history shortened, so keep your own copy as well.

  • Download order exports and payout reports at the end of every month.
  • Keep the platforms' fee invoices and statements with your supplier bills.
  • Store them in your own backed-up storage, named by platform and period.

These files hold customer details too. business.gov.au's tips for selling online include protecting customers' personal information, so limit who can open them.

General information

This guide is general information about how bookkeeping works in Australia. It is not personal advice, so check the sources below, or ask your accountant how it applies to your business. Sources checked 15 October 2026.

Sources

  1. Ecommerce (selling online)

    business.gov.au, Australian Government. Current at 16 October 2026, released 9 April 2024. Checked 16 October 2026.

    © Commonwealth of Australia 2020, licensed under CC BY 3.0 AU. Licence: CC BY 3.0 AU.

  2. Choose payment methods

    business.gov.au, Australian Government. Current at 16 October 2026, released 18 December 2025. Checked 16 October 2026.

    © Commonwealth of Australia 2020, licensed under CC BY 3.0 AU. Licence: CC BY 3.0 AU.

  3. How to invoice

    business.gov.au, Australian Government. Current at 16 October 2026, released 17 December 2025. Checked 16 October 2026.

    © Commonwealth of Australia 2020, licensed under CC BY 3.0 AU. Licence: CC BY 3.0 AU.

  4. Record-keeping tips

    Australian Taxation Office. Current at 25 October 2022 (QC70730), released 25 October 2022. Checked 15 October 2026.

    © Australian Taxation Office for the Commonwealth of Australia Licence: ATO website copyright notice (copy, adapt and distribute, without implying ATO endorsement).

  5. Manage your inventory

    business.gov.au, Australian Government. Current at 16 October 2026, released 19 November 2025. Checked 16 October 2026.

    © Commonwealth of Australia 2020, licensed under CC BY 3.0 AU. Licence: CC BY 3.0 AU.

  6. Record keeping

    business.gov.au, Australian Government. Current at 15 October 2026, released 7 November 2024. Checked 15 October 2026.

    © Commonwealth of Australia 2020, licensed under CC BY 3.0 AU. Licence: CC BY 3.0 AU.

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